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CSIRO National Soil Archive

What is the CSIRO National Soil Archive?

archive workerThe CSIRO National Soil Archive is a facility in Canberra where soil specimens and soil data are stored and where archiving takes place. The Archive stores 70,000 soil specimens that were collected for the purpose of soil research from around 9,500 sites Australia-wide. These soil specimens are invaluable “time capsules” for assessing temporal changes in soil properties, particularly as new analytical tools become available.  The collection of soil specimens is accompanied by an extensive database named NatSoil. The locations of the soil sites can be viewed in the Australian Soil Resource Information System (ASRIS). Site reports containing soil morphology and soil chemistry can be viewed or downloaded. Read the online help if you are unfamiliar with the ASRIS interactive map viewer.

Origins of the CSIRO National Soil Archive

In 2003, the soil specimen collections from the CSIRO Land and Water Divisions in Brisbane, Townsville, Adelaide, Hobart and Perth were sent to Canberra. While the vast majority of specimens have been collected by CSIRO, many thousands of specimens have been acquired as orphaned collections that were submitted by other organisations, predominantly State Agencies.In 2013, 5,400 of the 9,500 sites with soil specimens in the Archive had been archived. Archiving of stored soil specimens is an on-going core activity.

Mission: Conserving soil specimens and making them accessible for research

The mission of the CSIRO National Archive is to provide facilities and protocols for conserving the long-term scientific value of soil specimens and associated soil data, and to make these specimens and their data available for public research, both now and into the future. The CSIRO National Soil Archive is supported in its mission by the Australian Collaborative Land Evaluation Program (ACLEP) and the National Committee on Soil and Terrain (NCST).

Management of the CSIRO National Soil Archive

The CSIRO National Soil Archive is managed through a Steering Committee. The Committee comprises of the Research Group Leader of the Soil and Landscape Science group, the Research Team Leader of the National Soil Information Centre, the NatSoil database administrator and the CSIRO National Soil Archivist. The Committee is established to oversee sample submissions and user requests and to guide management of the CSIRO National Soil Archive. It meets on a regular basis, at least 3 times a year or as required to consider significant use requests. The charter of the CSIRO National Soil Archive Committee is to:

  • assist the development of policies
  • oversee and provide guidance to the management of the CSIRO National Soil Archive
  • review and assess requests for both the submission and the use of archive soil specimens
  • ensure standards and quality control of processes to maintain Archive soil specimen integrity
  • review procedures

Priorities for the Committee Priorities are to ensure fair and equitable access and use of soil specimens now and in the future; to oversee and regulate operational activities to ensure integrity of specimens and to facilitate support and promote the CSIRO National Soil Archive as an important national archive. For more information on archive management click here.

The Soil Specimens

Soil specimens and their associated data form the core of the Soil Archive. There are two types of soil specimens in the Archive, unarchived soil specimens and archived soil specimens. Archiving of stored soil specimens is ongoing.

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Soil specimens before archiving
Soil specimens after archiving

 

Unarchived Soil Specimens

The CSIRO National Soil Archive contains 70,000 soil specimens in total, of which 53,000 can be archived and have verifiable locational data. 16,000 specimens do not have verifiable locational data, but are exceptionally well-ordered and documented. These are mainly South Australian specimens dating back to the first half of last century. Archiving involves stocktaking, labelling and transfer of soil material. Specimens are delivered to the Archive in varying degrees of disorder. Field collection may have occurred 50 or 2 years ago, either from a soil pit or from using an auger. The soil material was air-dried soon after collection, often, but not always, passed through a 2 mm sieve, and sub sampled for chemical and physical or mineralogical analysis. Part or the entire specimen may have been ground. Data may be present in an old data format, only in print, or in an up to date database.

Archived soil specimens

Archiving of soil specimens involves data entry, stocktaking, labelling and transfer of soil material into 1 liter, PE plastic jars. For each archived specimen archive information is available in the database:  how much material is present, whether the material is present as whole soil or fine earth (< 2mm), and on which shelf it can be found. On every archive specimen, the label indicates the agency, project, observation ID, site ID, horizon (name), depth, sample (where there are more specimens per horizon) and layer. Together these variables provide a unique ID for every specimen, which is expressed in the barcode on the label.

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Soil material present as whole soil
Soil material present as fine earth

 

Data associated with the soil specimens

The associated data adds considerable value to the archived soil specimens. At the time of field collection, information about the location, land use and the collector itself is recorded. After collection and sample preparation, laboratory analyses provide chemical soil properties, although which properties are measured can vary from project to project. Because different laboratory methods return different results for many soil attributes, especially nutrient availability and some physical attributes, great care is taken to reflect this information in the database.

Some major projects and their contribution to the CSIRO National Soil Archive

Project/reference

Period

Study area

Focus of project

No. sites

No. specimens

ISSS 9th Congress
(Northcote et al. 1960-1968)

1960’s

Australia wide

Soil nomenclature, Handbook of Australian Soils

45

456

National Soil Fertility
(Colwell, 1979a,b)

1970’s

Australia wide

Soil fertility mapping

203

1968

Edgeroi
(McGarry et al., 1989)

1980’s

North eastern NSW

Cracking clays, productivity

210

1400

Cooloola
(i.e. Thompson et al., 1984 )

1980’s

Coastal south Queensland

Landscape dynamics, geomorphology

36

902

Soil Structure
(Geeves et al., 1995)

1980’s-1990’s

Wheat growing lands
southern NSW
northern Victoria

Soil degradation

101

624

Bago-Maragle
(Ryan et al, 1996; 2000)

1990’s

South eastern NSW

Sustainable management of forests

165

1054

Dalrymple
(Williams et al., 1997)

1990’s

Grazing lands Queensland

Tree clearing, salinity

2525

3760

 

Soil chemical analyses commonly conducted include pH, electrical conductivity (EC)), exchangeable cations, exchangeable aluminium, extractable potassium, phosphorus, sulphur, aluminium, iron, copper and zinc, ammonium-, nitrate- and total nitrogen, organic carbon and manganese. Less commonly, inorganic carbon, lead, zinc, cadmium, copper, mercury, cobalt, molybdenum, arsenic, chromium and nickel were determined.

Soil physical analyses were conducted less often because they are very labour- intensive and hence expensive. Soil physical analyses may include particle size distribution, bulk density, soil strength or structural stability. Hydraulic conductivity and water retention characteristics may be measured, in which case water content at field capacity, water content at wilting point, total available water content, total soil porosity and air-filled porosity of the soil at field capacity are known.

Soil mineralogy data may also be present. Micro morphological information from techniques such as microscopic observation, thermo luminescence dating, scanning electron microscopy (SEM), x-ray diffraction, grain counts, and electron probe microanalysis may be available.

The database holding all data, called NatSoil, is valuable in its own right. It is often the starting point for future investigations. Querying the database to select specimens based on certain soil properties, then re-analysing these soil specimens for other soil properties is the most common way in which the archived soil samples are currently being used.

New soil data are always being added to the database.

Holdings of the CSIRO National Soil Archive

The specimen collection of the Archive reflects the changes in research focus over the last 50 years. While the older specimens stored by the CSIRO National Soil Archive (from the 1920’s and the 1930’s) do not have location data of the currently required accuracy and are therefore not archivable, that part of the collection can still be used, if one is familiar with the publications. These specimens were collected prior to widespread application of pesticides and herbicides and before the start of nuclear testing in 1945. Archived soil specimens are invaluable “time capsules” for assessing temporal changes in soil properties, particularly as new analytical tools become available.

Archiving of stored soil specimens is an on-going core activity. New soil specimens are being submitted to the Soil Archive regularly.

Soil Samples in the CSIRO National Soil Archive

Financial Year

Archived samples Submitted soil specimens Cumulative archived specimens Total specimens Archivable specimens
2002-2003 0 54,140 0 58,140 41,940
2003-2004 2,000 0 2,000 58,140 41,940
2004-2005 5,000 0 7,000 58,140 41,940
2005-2006 5,500 0 12,000 58,140 41,940
2006-2007 2,600 500 15,600 58,640 42,440
2007-2008 4,200 1,200 19,800 59,840 43,640
2008-2009 3,000 300 23,200 60,140 43,940
2009-2010 5,900 3,600 26,200 63,740 47,540
2010-2011 2,400 4,500 32,200 68,240 52,040
2011-2012 2,400 1,200 34,600 69,440 53,240
2012-2013 2,400 420 37,200 69,760 53,560

 

Ongoing and future specimen submissions

Some of the projects that are lined up to contribute soil specimens in the near future:

  • The Department of Agriculture and Food WA has just submitted around 2500 soil samples that were collected during a mapping exercise in Western Australia conducted during the late 1980’s to the 1990’s.
  • The Agricultural Production Systems Research Unit (APSRU), is submitting hundreds of soil samples from agricultural land in various States, for which good soil physical and chemical soil data is available.
  • The Soil Condition Evaluation and Monitoring Project (SCEAM) in Tasmania, which commenced in 2004, has 100 long-term reference sites, which will be revisited every 5 years. The soil specimens are submitted to the CSIRO National Soil Archive.
  • The National Carbon Program, will submit an estimated 5000 soil specimens from agricultural lands around Australia with carbon data (data will remain confidential until published by the various State collaborators)

New submissions to the archive

To maintain important historic and contemporary soil specimens from around Australia for future analysis, the CSIRO National Archive supports continuing submission of additional collections of soil specimens to expand the Archive collection where possible.
Specimens submitted to the CSIRO National Soil Archive are required to meet a number of criteria to become part of the collection. Organisations wanting  to submit soil specimens need  to describe (using the Submission Form), the type and number of specimens, the amount of material per specimen, the amount of data, the data format, and the research to which these specimens contributed and justifications for archiving. Upon receiving this request, the CSIRO National Soil Archive Committee will review and assess the submission.
Priority will be given to specimens:

  • supporting priority initiatives (e.g. Soil Organic Carbon Monitoring)
  • representing important landscapes
  • addressing knowledge gaps, either temporally or spatially
  • used for widely publicised research
  • with data available in NatSoil (Microsoft Access)

For more information on submissions click here.

Scientific use of archived specimens

The CSIRO National Soil Archive balances the preservation of historic soil specimens and associated soil data (for future research) with the role of making these soil specimens and associated data available for current public research. Potential users of the archived soil specimens must adhere to the Archive guidelines as a matter of common courtesy and ethical responsibility. The archived soil specimens have been collected for the purposes of scientific research. Therefore, they are expected to be subject to treatments and analytical procedures required to advance science, at the discretion of the CSIRO National Soil Archive Steering Committee, even if this results in consumption or alteration of the specimen. Users need to be keenly aware however, that the quantity of soil material per specimen is limited, and exercise particular restraint when analysis is destructive. For more information on use click here.

Non-destructive analyses of the archived samples using Infrared Spectroscopy offers great opportunities. Raphael Viscarra Rossel from CSIRO Land and Water in Canberra has been an important user of the archived collection in order to develop a national soil diffuse reflectance spectral library. He is developing national scale digital soil mapping of mineral and organic composition using spectra of archived soil samples. For more information on mid Infrared Soil Analysis click here.

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